Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh23Q99PF4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm24140-201ENSMUST00000122773 326 ntBASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm45258-201ENSMUST00000210042 853 ntBASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Mir3100-201ENSMUST00000174918 65 ntBASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Cdh23Q99PF4 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm12745-201ENSMUST00000121767 214 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 AC192333.3-201ENSMUST00000224041 463 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm14699-201ENSMUST00000122340 228 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm28671-201ENSMUST00000187036 692 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm42687-201ENSMUST00000199075 164 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Gm23458-201ENSMUST00000083257 169 ntBASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh23Q99PF4 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms