Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rnf111Q99ML9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.33□□□□□ -0.59
Rnf111Q99ML9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 AA914427-201ENSMUST00000193194 1166 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Rprl1-202ENSMUST00000198476 238 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm13097-201ENSMUST00000210722 397 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rnf111Q99ML9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm38317-201ENSMUST00000195564 343 ntBASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rnf111Q99ML9 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms