Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chmp1b1Q99LU0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm14130-201ENSMUST00000118417 987 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm8885-201ENSMUST00000189382 598 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 AA914427-201ENSMUST00000193194 1166 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp1b1Q99LU0 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm27627-201ENSMUST00000183644 150 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm43962-201ENSMUST00000203898 190 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms