Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm15374-201ENSMUST00000119313 844 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm12943-201ENSMUST00000119616 210 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm14993-201ENSMUST00000121180 164 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm24809-201ENSMUST00000175318 271 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.33□□□□□ -0.44
Clp1Q99LI9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clp1Q99LI9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm15074-201ENSMUST00000117603 936 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm11578-201ENSMUST00000118530 459 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm17070-201ENSMUST00000170463 784 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm37293-201ENSMUST00000191658 295 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.32□□□□□ -0.44
Clp1Q99LI9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clp1Q99LI9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Gm15528-201ENSMUST00000117821 864 ntBASIC12.31□□□□□ -0.44
Clp1Q99LI9 Gm14213-201ENSMUST00000119778 768 ntBASIC12.31□□□□□ -0.44
Clp1Q99LI9 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Mir1905-201ENSMUST00000122779 82 ntBASIC12.31□□□□□ -0.44
Clp1Q99LI9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.31□□□□□ -0.44
Clp1Q99LI9 Gm16030-201ENSMUST00000159098 603 ntBASIC12.31□□□□□ -0.44
Clp1Q99LI9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms