Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm5298-201ENSMUST00000201122 892 ntBASIC13.54□□□□□ -0.24
Smc1bQ920F6 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.54□□□□□ -0.24
Smc1bQ920F6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.54□□□□□ -0.24
Smc1bQ920F6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.54□□□□□ -0.24
Smc1bQ920F6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.54□□□□□ -0.24
Smc1bQ920F6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smc1bQ920F6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Mir1956-201ENSMUST00000157748 65 ntBASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm22877-201ENSMUST00000175451 105 ntBASIC13.53□□□□□ -0.24
Smc1bQ920F6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.53□□□□□ -0.24
Smc1bQ920F6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.53□□□□□ -0.24
Smc1bQ920F6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.53□□□□□ -0.24
Smc1bQ920F6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smc1bQ920F6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Smc1bQ920F6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Gm11801-201ENSMUST00000117807 746 ntBASIC13.52□□□□□ -0.25
Smc1bQ920F6 Gm15595-201ENSMUST00000120840 961 ntBASIC13.52□□□□□ -0.25
Smc1bQ920F6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Gm9645-201ENSMUST00000197131 792 ntBASIC13.52□□□□□ -0.25
Smc1bQ920F6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smc1bQ920F6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms