Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Gm45501-201ENSMUST00000211468 2526 ntBASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc9Q8VC31 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Gm21115-201ENSMUST00000187565 2578 ntBASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Gm38271-201ENSMUST00000192296 1603 ntBASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc9Q8VC31 Gm6170-201ENSMUST00000187672 1388 ntBASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc9Q8VC31 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm14921-201ENSMUST00000118643 908 ntBASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc9Q8VC31 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc9Q8VC31 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc9Q8VC31 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms