Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Vps39Q8R5L3 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm43758-201ENSMUST00000199500 367 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm6450-201ENSMUST00000200896 574 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.67□□□□□ -0.54
Vps39Q8R5L3 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm26047-201ENSMUST00000157308 113 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Mir1938-201ENSMUST00000158746 100 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm26361-201ENSMUST00000158868 186 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm26047-202ENSMUST00000198840 115 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm17812-201ENSMUST00000204935 318 ntBASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps39Q8R5L3 Gm18065-201ENSMUST00000221395 526 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms