Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ddx54Q8K4L0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm15815-201ENSMUST00000120569 255 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Ighv1-70-201ENSMUST00000196509 351 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 AC115304.2-201ENSMUST00000226399 332 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.21■□□□□ 0.03
Ddx54Q8K4L0 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx54Q8K4L0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx54Q8K4L0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx54Q8K4L0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx54Q8K4L0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx54Q8K4L0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm15528-201ENSMUST00000117821 864 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm9630-201ENSMUST00000178304 885 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm7765-201ENSMUST00000182585 974 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm9102-201ENSMUST00000219250 465 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm10580-201ENSMUST00000097985 396 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm10582-201ENSMUST00000097987 396 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Gm10583-201ENSMUST00000097988 396 ntBASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx54Q8K4L0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 AC022682.1-201ENSMUST00000224624 2023 ntBASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Gm12129-201ENSMUST00000120104 1147 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms