Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm9368-201ENSMUST00000219348 831 ntBASIC14.38□□□□□ -0.11
Smc5Q8CG46 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smc5Q8CG46 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smc5Q8CG46 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm22133-201ENSMUST00000102082 109 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm20495-201ENSMUST00000173902 235 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Gm18262-201ENSMUST00000222560 1946 ntBASIC14.37□□□□□ -0.11
Smc5Q8CG46 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc5Q8CG46 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 AC125409.1-201ENSMUST00000223213 3370 ntBASIC14.36□□□□□ -0.11
Smc5Q8CG46 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm12463-201ENSMUST00000118271 849 ntBASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm17420-201ENSMUST00000164753 153 ntBASIC14.36□□□□□ -0.11
Smc5Q8CG46 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm27516-201ENSMUST00000184237 98 ntBASIC14.36□□□□□ -0.11
Smc5Q8CG46 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 AA914427-201ENSMUST00000193194 1166 ntBASIC14.36□□□□□ -0.11
Smc5Q8CG46 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc5Q8CG46 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms