Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm13045-201ENSMUST00000119019 712 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm37835-201ENSMUST00000193305 361 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Gm18065-201ENSMUST00000221395 526 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Spcs1-203ENSMUST00000226374 592 ntBASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc60Q8C4J0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm14071-201ENSMUST00000117817 509 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Mir5132-201ENSMUST00000175166 71 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Mir6979-201ENSMUST00000183927 56 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm9540-201ENSMUST00000188230 478 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm29499-201ENSMUST00000189151 486 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm28329-201ENSMUST00000191208 689 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm29171-201ENSMUST00000191397 486 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm43002-201ENSMUST00000200310 155 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc60Q8C4J0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Gm3150-201ENSMUST00000166418 204 ntBASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms