Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tsen54Q8C2A2 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm7809-201ENSMUST00000153199 742 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm27572-201ENSMUST00000183702 255 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm38002-201ENSMUST00000193255 180 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm42627-201ENSMUST00000197347 224 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm19309-201ENSMUST00000218295 205 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tsen54Q8C2A2 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tsen54Q8C2A2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm22018-201ENSMUST00000104357 131 ntBASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Mir1938-201ENSMUST00000158746 100 ntBASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Gm42693-201ENSMUST00000196779 631 ntBASIC9.77□□□□□ -0.85
Tsen54Q8C2A2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms