Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sh3rf2Q8BZT2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Sh3rf2Q8BZT2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm26013-201ENSMUST00000104404 119 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm15615-201ENSMUST00000118876 198 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm15782-201ENSMUST00000121073 445 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Mir1901-201ENSMUST00000122616 78 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm7741-201ENSMUST00000181445 989 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm38210-201ENSMUST00000191944 809 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sh3rf2Q8BZT2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm12247-201ENSMUST00000117585 670 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Mir1956-201ENSMUST00000157748 65 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm25072-201ENSMUST00000175233 235 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Mir6998-201ENSMUST00000183343 64 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm28324-201ENSMUST00000187913 264 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm23105-201ENSMUST00000083719 134 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms