Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm9204-201ENSMUST00000212641 947 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 AC154759.1-201ENSMUST00000224137 1159 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm10254-201ENSMUST00000052888 867 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gm42970-201ENSMUST00000196407 1352 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC16.32■□□□□ 0.2
Usp54Q8BL06 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp54Q8BL06 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm4917-201ENSMUST00000121452 650 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Mup-ps29-201ENSMUST00000122281 202 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm18733-202ENSMUST00000174447 401 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm18014-201ENSMUST00000183369 817 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm7238-201ENSMUST00000206467 973 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 AC156031.2-201ENSMUST00000213107 3310 ntBASIC16.31■□□□□ 0.2
Usp54Q8BL06 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp54Q8BL06 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm12418-201ENSMUST00000118116 942 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm1826-201ENSMUST00000118646 1162 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Arhgef33-207ENSMUST00000224966 490 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 CT030135.2-201ENSMUST00000225255 893 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm42943-201ENSMUST00000199676 3242 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Btrc-209ENSMUST00000224478 2194 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Snord55-201ENSMUST00000174939 79 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm6331-201ENSMUST00000217890 450 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Gm26782-203ENSMUST00000227103 751 ntBASIC16.3■□□□□ 0.2
Usp54Q8BL06 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp54Q8BL06 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp54Q8BL06 Gm6170-201ENSMUST00000187672 1388 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms