Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm43433-201ENSMUST00000196573 481 ntBASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Lect2-202ENSMUST00000225183 823 ntBASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2bQ8BJF9 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm4607-201ENSMUST00000206649 577 ntBASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chmp2bQ8BJF9 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2bQ8BJF9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms