Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm12857-201ENSMUST00000117678 592 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm13809-201ENSMUST00000117921 597 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm45398-201ENSMUST00000210561 165 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm10288-201ENSMUST00000084614 537 ntBASIC11.22□□□□□ -0.61
SynbQ8BI41 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SynbQ8BI41 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SynbQ8BI41 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
SynbQ8BI41 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Gm11511-201ENSMUST00000118146 540 ntBASIC11.21□□□□□ -0.61
SynbQ8BI41 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.21□□□□□ -0.61
SynbQ8BI41 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SynbQ8BI41 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.21□□□□□ -0.61
SynbQ8BI41 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.21□□□□□ -0.61
SynbQ8BI41 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.21□□□□□ -0.61
SynbQ8BI41 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SynbQ8BI41 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SynbQ8BI41 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SynbQ8BI41 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.21□□□□□ -0.62
SynbQ8BI41 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SynbQ8BI41 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
SynbQ8BI41 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms