Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm12073-201ENSMUST00000117382 524 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm11450-201ENSMUST00000121144 333 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm18734-201ENSMUST00000172937 808 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm5733-201ENSMUST00000190232 939 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm7848-201ENSMUST00000210739 718 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scube3Q66PY1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm4310-201ENSMUST00000177847 889 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm9192-201ENSMUST00000183221 985 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm2553-201ENSMUST00000215986 605 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 AC133598.4-201ENSMUST00000224577 454 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm10617-201ENSMUST00000098368 1172 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gm42822-201ENSMUST00000200507 1529 ntBASIC12.47□□□□□ -0.41
Scube3Q66PY1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scube3Q66PY1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scube3Q66PY1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scube3Q66PY1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scube3Q66PY1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scube3Q66PY1 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms