Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox17Q61473 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.9□□□□□ -0.66
Sox17Q61473 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox17Q61473 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.9□□□□□ -0.66
Sox17Q61473 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.9□□□□□ -0.66
Sox17Q61473 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sox17Q61473 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.9□□□□□ -0.66
Sox17Q61473 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.9□□□□□ -0.66
Sox17Q61473 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.9□□□□□ -0.67
Sox17Q61473 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sox17Q61473 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.89□□□□□ -0.67
Sox17Q61473 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox17Q61473 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Sox17Q61473 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.89□□□□□ -0.67
Sox17Q61473 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Sox17Q61473 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Snora73a-201ENSMUST00000082453 205 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox17Q61473 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.89□□□□□ -0.67
Sox17Q61473 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox17Q61473 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox17Q61473 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.88□□□□□ -0.67
Sox17Q61473 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox17Q61473 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms