Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.87□□□□□ -0.35
Ift88Q61371 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.87□□□□□ -0.35
Ift88Q61371 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.87□□□□□ -0.35
Ift88Q61371 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ift88Q61371 Gm27501-201ENSMUST00000183599 107 ntBASIC12.87□□□□□ -0.35
Ift88Q61371 Gm8885-201ENSMUST00000189382 598 ntBASIC12.87□□□□□ -0.35
Ift88Q61371 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.87□□□□□ -0.35
Ift88Q61371 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ift88Q61371 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ift88Q61371 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ift88Q61371 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ift88Q61371 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.87□□□□□ -0.35
Ift88Q61371 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Ift88Q61371 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.87□□□□□ -0.35
Ift88Q61371 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ift88Q61371 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.86□□□□□ -0.35
Ift88Q61371 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.86□□□□□ -0.35
Ift88Q61371 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Gm2991-201ENSMUST00000173338 480 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Gm32999-201ENSMUST00000192693 562 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Gm18062-201ENSMUST00000208020 547 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Gm18055-201ENSMUST00000208254 547 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ift88Q61371 Gm5705-201ENSMUST00000066241 711 ntBASIC12.86□□□□□ -0.35
Ift88Q61371 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ift88Q61371 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ift88Q61371 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ift88Q61371 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ift88Q61371 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm17420-201ENSMUST00000164753 153 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ift88Q61371 Gm28937-201ENSMUST00000185413 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm29400-201ENSMUST00000187208 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm28662-201ENSMUST00000188446 695 ntBASIC12.85□□□□□ -0.35
Ift88Q61371 Gm28251-201ENSMUST00000188835 695 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms