Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm18367-201ENSMUST00000176139 600 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm18827-201ENSMUST00000188341 790 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm10774-201ENSMUST00000188689 204 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm10254-201ENSMUST00000052888 867 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Six4Q61321 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Six4Q61321 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six4Q61321 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Six4Q61321 Gm22711-201ENSMUST00000116890 133 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Gm12407-201ENSMUST00000180219 324 ntBASIC11.74□□□□□ -0.53
Six4Q61321 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six4Q61321 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.74□□□□□ -0.53
Six4Q61321 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Six4Q61321 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six4Q61321 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Six4Q61321 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.73□□□□□ -0.53
Six4Q61321 Gm9062-201ENSMUST00000117712 727 ntBASIC11.73□□□□□ -0.53
Six4Q61321 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.73□□□□□ -0.53
Six4Q61321 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.73□□□□□ -0.53
Six4Q61321 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.73□□□□□ -0.53
Six4Q61321 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm10051-201ENSMUST00000145209 414 ntBASIC11.73□□□□□ -0.53
Six4Q61321 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.73□□□□□ -0.53
Six4Q61321 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Mir5132-201ENSMUST00000175166 71 ntBASIC11.73□□□□□ -0.53
Six4Q61321 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six4Q61321 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.73□□□□□ -0.53
Six4Q61321 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms