Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prdm1Q60636 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Lect2-202ENSMUST00000225183 823 ntBASIC13.61□□□□□ -0.23
Prdm1Q60636 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Prdm1Q60636 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Prdm1Q60636 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.61□□□□□ -0.23
Prdm1Q60636 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.61□□□□□ -0.23
Prdm1Q60636 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Prdm1Q60636 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm14071-201ENSMUST00000117817 509 ntBASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm18367-201ENSMUST00000176139 600 ntBASIC13.6□□□□□ -0.23
Prdm1Q60636 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm9540-201ENSMUST00000188230 478 ntBASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm10774-201ENSMUST00000188689 204 ntBASIC13.6□□□□□ -0.23
Prdm1Q60636 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Mir7686-201ENSMUST00000200604 57 ntBASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Prdm1Q60636 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Prdm1Q60636 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prdm1Q60636 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm13611-201ENSMUST00000118269 318 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm3150-201ENSMUST00000166418 204 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm20495-201ENSMUST00000173902 235 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Mir3102-201ENSMUST00000175555 104 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Mir6546-201ENSMUST00000184460 62 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.59□□□□□ -0.23
Prdm1Q60636 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.59□□□□□ -0.23
Prdm1Q60636 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Prdm1Q60636 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Prdm1Q60636 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms