Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Gm10263-201ENSMUST00000085163 300 ntBASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc85aQ5SP85 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc85aQ5SP85 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm12274-201ENSMUST00000120062 385 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm9630-201ENSMUST00000178304 885 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc85aQ5SP85 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm13422-201ENSMUST00000118834 504 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm13019-201ENSMUST00000120000 276 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm12453-201ENSMUST00000121981 331 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm22846-201ENSMUST00000157706 270 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Mir6941-201ENSMUST00000184711 59 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm28833-201ENSMUST00000189671 559 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm43671-201ENSMUST00000200422 433 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm43912-201ENSMUST00000204352 538 ntBASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc85aQ5SP85 Gm5468-202ENSMUST00000227851 682 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms