Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Matn2-203ENSMUST00000226766 3252 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Vps13aQ5H8C4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Vps13aQ5H8C4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Gm42821-201ENSMUST00000199771 489 ntBASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Vps13aQ5H8C4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm18014-201ENSMUST00000183369 817 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm37284-201ENSMUST00000193607 539 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm44173-201ENSMUST00000204316 132 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Gm44236-201ENSMUST00000204492 513 ntBASIC11.2□□□□□ -0.62
Vps13aQ5H8C4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms