Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm9136-201ENSMUST00000193368 454 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm23949-201ENSMUST00000104027 127 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm11439-201ENSMUST00000118598 409 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm2553-201ENSMUST00000215986 605 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Gm8420-201ENSMUST00000097103 598 ntBASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Syne3Q4FZC9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Syne3Q4FZC9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm14028-201ENSMUST00000117434 479 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm14208-201ENSMUST00000119645 678 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Syne3Q4FZC9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms