Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm22711-201ENSMUST00000116890 133 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm10051-201ENSMUST00000145209 414 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm3150-201ENSMUST00000166418 204 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm10807-201ENSMUST00000177134 795 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm29499-201ENSMUST00000189151 486 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm28329-201ENSMUST00000191208 689 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm29171-201ENSMUST00000191397 486 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm43378-201ENSMUST00000199336 582 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Mir7686-201ENSMUST00000200604 57 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm44100-201ENSMUST00000204329 436 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nlrc4Q3UP24 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm14193-201ENSMUST00000105067 153 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm24844-201ENSMUST00000158679 127 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Lect2-202ENSMUST00000225183 823 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nlrc4Q3UP24 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nlrc4Q3UP24 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms