Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.07□□□□□ -0.64
Treml4Q3LRV9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Treml4Q3LRV9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm13600-201ENSMUST00000117949 744 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm16071-201ENSMUST00000119589 793 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm27530-201ENSMUST00000184096 98 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm17826-201ENSMUST00000189720 798 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm3551-201ENSMUST00000190750 664 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm17877-201ENSMUST00000192578 814 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm17889-201ENSMUST00000198410 598 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Treml4Q3LRV9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.05□□□□□ -0.64
Treml4Q3LRV9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms