Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd8Q09XV5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm13284-201ENSMUST00000121020 547 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm42660-201ENSMUST00000197733 947 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 AC123698.1-201ENSMUST00000227090 402 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Pea15b-202ENSMUST00000183185 555 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm17799-201ENSMUST00000183270 667 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm7516-201ENSMUST00000186198 706 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd8Q09XV5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm13592-201ENSMUST00000118148 1010 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm25804-201ENSMUST00000122785 188 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm25770-201ENSMUST00000158566 115 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm20281-201ENSMUST00000188225 267 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm21054-201ENSMUST00000203981 380 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Id2-203ENSMUST00000222667 958 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm16410-201ENSMUST00000094550 774 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm44443-201ENSMUST00000204396 5633 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm13377-201ENSMUST00000137984 683 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm22669-201ENSMUST00000158723 318 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Gm44460-201ENSMUST00000196179 129 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 AC154669.1-201ENSMUST00000224405 482 ntBASIC10.4□□□□□ -0.74
Chd8Q09XV5 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd8Q09XV5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Chd8Q09XV5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms