Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm15573-201ENSMUST00000119487 540 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm9192-201ENSMUST00000183221 985 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm9540-201ENSMUST00000188230 478 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm6450-201ENSMUST00000200896 574 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm43930-201ENSMUST00000203868 845 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cntn3Q07409 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cntn3Q07409 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.26□□□□□ -0.45
Cntn3Q07409 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm17391-201ENSMUST00000171036 126 ntBASIC12.25□□□□□ -0.45
Cntn3Q07409 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm44126-201ENSMUST00000204831 514 ntBASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm17831-201ENSMUST00000205579 900 ntBASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.25□□□□□ -0.45
Cntn3Q07409 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cntn3Q07409 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cntn3Q07409 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cntn3Q07409 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cntn3Q07409 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.24□□□□□ -0.45
Cntn3Q07409 Gm14193-201ENSMUST00000105067 153 ntBASIC12.24□□□□□ -0.45
Cntn3Q07409 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cntn3Q07409 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.24□□□□□ -0.45
Cntn3Q07409 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.24□□□□□ -0.45
Cntn3Q07409 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cntn3Q07409 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms