Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm14704-201ENSMUST00000120300 874 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm12208-201ENSMUST00000122004 163 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm12885-201ENSMUST00000122246 328 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm18734-201ENSMUST00000172937 808 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm5070-201ENSMUST00000177599 862 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm37072-201ENSMUST00000194570 837 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.6□□□□□ -0.55
Atf4Q06507 AC154634.2-201ENSMUST00000225983 1184 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 AC131100.2-201ENSMUST00000227701 998 ntBASIC11.6□□□□□ -0.55
Atf4Q06507 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Atf4Q06507 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Atf4Q06507 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Atf4Q06507 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.59□□□□□ -0.55
Atf4Q06507 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC11.59□□□□□ -0.55
Atf4Q06507 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Atf4Q06507 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Atf4Q06507 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm15933-201ENSMUST00000117215 616 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Gm9062-201ENSMUST00000117712 727 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm24749-201ENSMUST00000157838 343 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.59□□□□□ -0.55
Atf4Q06507 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Atf4Q06507 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Atf4Q06507 Gm43136-201ENSMUST00000200403 636 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Gm42733-201ENSMUST00000201272 519 ntBASIC11.59□□□□□ -0.55
Atf4Q06507 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms