Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
Npas1P97459 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Npas1P97459 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Npas1P97459 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Gm12314-201ENSMUST00000118104 538 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Gm11814-201ENSMUST00000119515 929 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.79□□□□□ -0.84
Npas1P97459 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Gm27839-201ENSMUST00000184242 106 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Gm27892-201ENSMUST00000185017 106 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.79□□□□□ -0.84
Npas1P97459 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Npas1P97459 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Npas1P97459 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Npas1P97459 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Npas1P97459 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.79□□□□□ -0.84
Npas1P97459 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Npas1P97459 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Npas1P97459 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Npas1P97459 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Npas1P97459 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.78□□□□□ -0.84
Npas1P97459 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.78□□□□□ -0.84
Npas1P97459 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.78□□□□□ -0.84
Npas1P97459 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Npas1P97459 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms