Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Stra8P70278 Gm11930-201ENSMUST00000117788 190 ntBASIC16.1■□□□□ 0.17
Stra8P70278 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.1■□□□□ 0.17
Stra8P70278 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.1■□□□□ 0.17
Stra8P70278 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Gm20482-202ENSMUST00000174729 825 ntBASIC16.1■□□□□ 0.17
Stra8P70278 Gm6114-201ENSMUST00000182472 968 ntBASIC16.1■□□□□ 0.17
Stra8P70278 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.1■□□□□ 0.17
Stra8P70278 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 AC125374.1-201ENSMUST00000213573 1400 ntBASIC16.1■□□□□ 0.17
Stra8P70278 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Stra8P70278 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stra8P70278 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC16.09■□□□□ 0.17
Stra8P70278 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Gm27320-201ENSMUST00000184892 109 ntBASIC16.09■□□□□ 0.17
Stra8P70278 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.09■□□□□ 0.17
Stra8P70278 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.09■□□□□ 0.17
Stra8P70278 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.09■□□□□ 0.17
Stra8P70278 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Stra8P70278 Gm9996-201ENSMUST00000070359 913 ntBASIC16.09■□□□□ 0.17
Stra8P70278 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.09■□□□□ 0.17
Stra8P70278 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC16.09■□□□□ 0.17
Stra8P70278 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC16.09■□□□□ 0.17
Stra8P70278 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Gm18986-201ENSMUST00000216029 1986 ntBASIC16.09■□□□□ 0.17
Stra8P70278 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Stra8P70278 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC16.09■□□□□ 0.17
Stra8P70278 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stra8P70278 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Stra8P70278 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Stra8P70278 AC122811.1-201ENSMUST00000222257 2921 ntBASIC16.08■□□□□ 0.16
Stra8P70278 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.08■□□□□ 0.16
Stra8P70278 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.08■□□□□ 0.16
Stra8P70278 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Gm17376-201ENSMUST00000166016 84 ntBASIC16.08■□□□□ 0.16
Stra8P70278 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.08■□□□□ 0.16
Stra8P70278 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Stra8P70278 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.08■□□□□ 0.16
Stra8P70278 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.08■□□□□ 0.16
Stra8P70278 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Stra8P70278 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.08■□□□□ 0.16
Stra8P70278 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.08■□□□□ 0.16
Stra8P70278 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Stra8P70278 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms