Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Lsm6P62313 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Lsm6P62313 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Lsm6P62313 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm12857-201ENSMUST00000117678 592 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm3332-201ENSMUST00000189337 928 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Gm5982-201ENSMUST00000196234 512 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Gm807-202ENSMUST00000224929 408 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.26□□□□□ -0.77
Lsm6P62313 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.26□□□□□ -0.77
Lsm6P62313 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Lsm6P62313 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm6P62313 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm6P62313 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm23596-201ENSMUST00000104304 132 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm11500-201ENSMUST00000118237 601 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm15711-201ENSMUST00000118889 535 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm12380-201ENSMUST00000119012 544 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm7940-201ENSMUST00000218195 769 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Lect2-202ENSMUST00000225183 823 ntBASIC10.25□□□□□ -0.77
Lsm6P62313 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Lsm6P62313 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Lsm6P62313 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Lsm6P62313 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms