Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.41□□□□□ -0.26
Tpm2P58774 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tpm2P58774 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tpm2P58774 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.41□□□□□ -0.26
Tpm2P58774 Gm37201-201ENSMUST00000191845 523 ntBASIC13.41□□□□□ -0.26
Tpm2P58774 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.41□□□□□ -0.26
Tpm2P58774 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.41□□□□□ -0.26
Tpm2P58774 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tpm2P58774 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Tpm2P58774 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tpm2P58774 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tpm2P58774 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC13.41□□□□□ -0.26
Tpm2P58774 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC13.41□□□□□ -0.26
Tpm2P58774 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tpm2P58774 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.4□□□□□ -0.26
Tpm2P58774 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm6714-201ENSMUST00000218677 2330 ntBASIC13.4□□□□□ -0.26
Tpm2P58774 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm5703-201ENSMUST00000186658 3973 ntBASIC13.4□□□□□ -0.26
Tpm2P58774 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.4□□□□□ -0.26
Tpm2P58774 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.4□□□□□ -0.26
Tpm2P58774 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm3890-201ENSMUST00000182416 207 ntBASIC13.4□□□□□ -0.26
Tpm2P58774 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.4□□□□□ -0.26
Tpm2P58774 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Tpm2P58774 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tpm2P58774 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.4□□□□□ -0.26
Tpm2P58774 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tpm2P58774 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tpm2P58774 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Tpm2P58774 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tpm2P58774 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tpm2P58774 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tpm2P58774 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm24934-201ENSMUST00000103764 111 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Gm12390-201ENSMUST00000117897 397 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Gm14999-201ENSMUST00000121039 624 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.39□□□□□ -0.27
Tpm2P58774 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm42693-201ENSMUST00000196779 631 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm39404-201ENSMUST00000216350 313 ntBASIC13.39□□□□□ -0.27
Tpm2P58774 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Tpm2P58774 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Tpm2P58774 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms