Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.58□□□□□ -0.24
Cacnb3P54285 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.58□□□□□ -0.24
Cacnb3P54285 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.58□□□□□ -0.24
Cacnb3P54285 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cacnb3P54285 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Cacnb3P54285 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm18776-201ENSMUST00000188833 654 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.57□□□□□ -0.24
Cacnb3P54285 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cacnb3P54285 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cacnb3P54285 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm14071-201ENSMUST00000117817 509 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm13549-201ENSMUST00000118339 796 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cacnb3P54285 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cacnb3P54285 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.56□□□□□ -0.24
Cacnb3P54285 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Cacnb3P54285 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms