Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm12579-201ENSMUST00000118040 783 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm8723-201ENSMUST00000166076 820 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm8701-201ENSMUST00000169259 874 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm29499-201ENSMUST00000189151 486 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm28329-201ENSMUST00000191208 689 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm29171-201ENSMUST00000191397 486 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm5870-201ENSMUST00000196461 282 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.64□□□□□ -0.55
Atxn1P54254 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Atxn1P54254 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Atxn1P54254 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Atxn1P54254 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm14942-201ENSMUST00000119642 336 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm45527-201ENSMUST00000211052 774 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.63□□□□□ -0.55
Atxn1P54254 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Atxn1P54254 Gm5513-201ENSMUST00000072982 1218 ntBASIC11.63□□□□□ -0.55
Atxn1P54254 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Atxn1P54254 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Atxn1P54254 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.62□□□□□ -0.55
Atxn1P54254 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Atxn1P54254 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Atxn1P54254 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Atxn1P54254 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Atxn1P54254 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms