Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox1P53783 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox1P53783 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Sox1P53783 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Sox1P53783 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Sox1P53783 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Gm25872-201ENSMUST00000177784 100 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Gm6216-201ENSMUST00000182390 687 ntBASIC11.95□□□□□ -0.5
Sox1P53783 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sox1P53783 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox1P53783 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Gm8255-201ENSMUST00000218693 305 ntBASIC11.95□□□□□ -0.5
Sox1P53783 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox1P53783 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox1P53783 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox1P53783 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox1P53783 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sox1P53783 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.95□□□□□ -0.5
Sox1P53783 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox1P53783 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm14760-201ENSMUST00000121831 999 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm7572-201ENSMUST00000182616 766 ntBASIC11.94□□□□□ -0.5
Sox1P53783 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox1P53783 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.94□□□□□ -0.5
Sox1P53783 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox1P53783 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox1P53783 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Sox1P53783 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.94□□□□□ -0.5
Sox1P53783 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox1P53783 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Sox1P53783 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.93□□□□□ -0.5
Sox1P53783 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Sox1P53783 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms