Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.22□□□□□ -0.61
Prox1P48437 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.22□□□□□ -0.61
Prox1P48437 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Prox1P48437 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm18711-201ENSMUST00000199341 750 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Gm6013-201ENSMUST00000212264 699 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.22□□□□□ -0.61
Prox1P48437 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.22□□□□□ -0.61
Prox1P48437 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Prox1P48437 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Prox1P48437 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.22□□□□□ -0.61
Prox1P48437 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.21□□□□□ -0.61
Prox1P48437 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.21□□□□□ -0.61
Prox1P48437 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Prox1P48437 Gm43179-201ENSMUST00000198797 275 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.21□□□□□ -0.61
Prox1P48437 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Gm7399-201ENSMUST00000032395 858 ntBASIC11.21□□□□□ -0.61
Prox1P48437 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Prox1P48437 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Prox1P48437 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.21□□□□□ -0.62
Prox1P48437 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.21□□□□□ -0.62
Prox1P48437 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Prox1P48437 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.21□□□□□ -0.62
Prox1P48437 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Prox1P48437 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Prox1P48437 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.2□□□□□ -0.62
Prox1P48437 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Prox1P48437 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Prox1P48437 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms