Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm3329-201ENSMUST00000159873 556 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm20495-201ENSMUST00000173902 235 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm7848-201ENSMUST00000210739 718 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Rgr-203ENSMUST00000225070 4704 ntBASIC10.68□□□□□ -0.7
Nkx2-2P42586 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-2P42586 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.67□□□□□ -0.7
Nkx2-2P42586 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm8731-201ENSMUST00000118088 412 ntBASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm4909-201ENSMUST00000118749 794 ntBASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-2P42586 Mir6927-201ENSMUST00000184494 71 ntBASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.67□□□□□ -0.7
Nkx2-2P42586 Gm29499-201ENSMUST00000189151 486 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms