Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh4P39038 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
Cdh4P39038 Gm7851-201ENSMUST00000117574 323 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm8199-201ENSMUST00000121323 823 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh4P39038 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Gm28937-201ENSMUST00000185413 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm29400-201ENSMUST00000187208 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm28662-201ENSMUST00000188446 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm28251-201ENSMUST00000188835 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm37318-201ENSMUST00000194325 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm38017-201ENSMUST00000194768 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm37287-201ENSMUST00000195449 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm37793-201ENSMUST00000195548 695 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Gm6905-201ENSMUST00000205729 511 ntBASIC11.2□□□□□ -0.62
Cdh4P39038 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Cdh4P39038 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh4P39038 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh4P39038 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cdh4P39038 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Gm13461-201ENSMUST00000120980 662 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Gm12566-201ENSMUST00000121479 359 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cdh4P39038 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Gm5714-201ENSMUST00000197343 566 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Ntng1-201ENSMUST00000051253 327 ntBASIC11.19□□□□□ -0.62
Cdh4P39038 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdh4P39038 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdh4P39038 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdh4P39038 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms