Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Rom1P32958 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.21□□□□□ -0.93
Rom1P32958 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Rom1P32958 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Rom1P32958 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Rom1P32958 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Rom1P32958 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Gm11918-201ENSMUST00000121660 179 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Gm24548-201ENSMUST00000158650 108 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm8652-201ENSMUST00000181363 964 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm27892-201ENSMUST00000185017 106 ntBASIC9.21□□□□□ -0.94
Rom1P32958 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Gm8515-201ENSMUST00000194852 576 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm18893-201ENSMUST00000198416 943 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm19287-201ENSMUST00000203190 358 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.21□□□□□ -0.94
Rom1P32958 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.21□□□□□ -0.94
Rom1P32958 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Rom1P32958 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Rom1P32958 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rom1P32958 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rom1P32958 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.2□□□□□ -0.94
Rom1P32958 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Rom1P32958 Gm12091-201ENSMUST00000146791 830 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.2□□□□□ -0.94
Rom1P32958 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rom1P32958 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 Gm27847-201ENSMUST00000183711 107 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Gm27375-201ENSMUST00000183799 107 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Rom1P32958 Gm18187-201ENSMUST00000196476 984 ntBASIC9.2□□□□□ -0.94
Rom1P32958 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.2□□□□□ -0.94
Rom1P32958 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.2□□□□□ -0.94
Rom1P32958 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms