Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Hoxc5P32043 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hoxc5P32043 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm14381-201ENSMUST00000122105 414 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm9192-201ENSMUST00000183221 985 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm32999-201ENSMUST00000192693 562 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm44364-201ENSMUST00000198368 141 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxc5P32043 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.82□□□□□ -0.68
Hoxc5P32043 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Hoxc5P32043 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm15198-201ENSMUST00000117283 177 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm6114-201ENSMUST00000182472 968 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 AA914427-201ENSMUST00000193194 1166 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm43962-201ENSMUST00000203898 190 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm8956-201ENSMUST00000203939 825 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm44967-201ENSMUST00000207047 631 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Olfr582-201ENSMUST00000098212 960 ntBASIC10.81□□□□□ -0.68
Hoxc5P32043 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxc5P32043 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxc5P32043 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms