Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col2a1P28481 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.08□□□□□ -0.31
Col2a1P28481 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col2a1P28481 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Col2a1P28481 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.08□□□□□ -0.32
Col2a1P28481 Gm13600-201ENSMUST00000117949 744 ntBASIC13.08□□□□□ -0.32
Col2a1P28481 Gm13022-201ENSMUST00000121181 285 ntBASIC13.08□□□□□ -0.32
Col2a1P28481 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Gm16165-201ENSMUST00000160140 795 ntBASIC13.08□□□□□ -0.32
Col2a1P28481 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.08□□□□□ -0.32
Col2a1P28481 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.08□□□□□ -0.32
Col2a1P28481 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col2a1P28481 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.07□□□□□ -0.32
Col2a1P28481 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.07□□□□□ -0.32
Col2a1P28481 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.07□□□□□ -0.32
Col2a1P28481 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.07□□□□□ -0.32
Col2a1P28481 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.07□□□□□ -0.32
Col2a1P28481 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.07□□□□□ -0.32
Col2a1P28481 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.07□□□□□ -0.32
Col2a1P28481 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Gm9111-201ENSMUST00000219394 709 ntBASIC13.07□□□□□ -0.32
Col2a1P28481 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.07□□□□□ -0.32
Col2a1P28481 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col2a1P28481 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Col2a1P28481 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.06□□□□□ -0.32
Col2a1P28481 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Col2a1P28481 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.06□□□□□ -0.32
Col2a1P28481 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.06□□□□□ -0.32
Col2a1P28481 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm11340-201ENSMUST00000119226 412 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col2a1P28481 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Gm44814-201ENSMUST00000207018 434 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Gm18035-201ENSMUST00000211962 589 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col2a1P28481 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.06□□□□□ -0.32
Col2a1P28481 Gm7589-201ENSMUST00000085631 534 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms