Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm14130-201ENSMUST00000118417 987 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Gm13996-201ENSMUST00000118456 430 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Gm15004-201ENSMUST00000119192 630 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm24749-201ENSMUST00000157838 343 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm28686-201ENSMUST00000187404 609 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm19287-201ENSMUST00000203190 358 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ccl6P27784 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ccl6P27784 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.08□□□□□ -0.96
Ccl6P27784 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccl6P27784 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccl6P27784 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Mir877-201ENSMUST00000104738 85 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 Gm15711-201ENSMUST00000118889 535 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.07□□□□□ -0.96
Ccl6P27784 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Gm38241-201ENSMUST00000192641 898 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 Gm7003-201ENSMUST00000195089 312 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC9.07□□□□□ -0.96
Ccl6P27784 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.07□□□□□ -0.96
Ccl6P27784 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.07□□□□□ -0.96
Ccl6P27784 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Ccl6P27784 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Ccl6P27784 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ccl6P27784 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccl6P27784 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms