Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.23□□□□□ -0.61
BdnfP21237 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.23□□□□□ -0.61
BdnfP21237 Gm27501-201ENSMUST00000183599 107 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.23□□□□□ -0.61
BdnfP21237 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.23□□□□□ -0.61
BdnfP21237 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Gm8712-201ENSMUST00000221090 701 ntBASIC11.23□□□□□ -0.61
BdnfP21237 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
BdnfP21237 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
BdnfP21237 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.23□□□□□ -0.61
BdnfP21237 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
BdnfP21237 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BdnfP21237 Gm19445-201ENSMUST00000193649 2438 ntBASIC11.23□□□□□ -0.61
BdnfP21237 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
BdnfP21237 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm5419-201ENSMUST00000119301 527 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.22□□□□□ -0.61
BdnfP21237 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm18893-201ENSMUST00000198416 943 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.22□□□□□ -0.61
BdnfP21237 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm10254-201ENSMUST00000052888 867 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
BdnfP21237 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm10478-201ENSMUST00000084451 396 ntBASIC11.22□□□□□ -0.61
BdnfP21237 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BdnfP21237 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BdnfP21237 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.21□□□□□ -0.61
BdnfP21237 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
BdnfP21237 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
BdnfP21237 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
BdnfP21237 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms