Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sdc1P18828 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sdc1P18828 Gm14247-201ENSMUST00000120950 237 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm6114-201ENSMUST00000182472 968 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm38314-201ENSMUST00000195709 625 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm18711-201ENSMUST00000199341 750 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Chchd1-203ENSMUST00000224633 557 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sdc1P18828 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sdc1P18828 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.51□□□□□ -0.89
Sdc1P18828 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Sdc1P18828 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Sdc1P18828 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Sdc1P18828 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Sdc1P18828 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.5□□□□□ -0.89
Sdc1P18828 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Gm22189-201ENSMUST00000103822 86 ntBASIC9.5□□□□□ -0.89
Sdc1P18828 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.5□□□□□ -0.89
Sdc1P18828 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC9.5□□□□□ -0.89
Sdc1P18828 Gm27838-201ENSMUST00000184829 128 ntBASIC9.5□□□□□ -0.89
Sdc1P18828 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.5□□□□□ -0.89
Sdc1P18828 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Sdc1P18828 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms