Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Rc3h2P0C090 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rc3h2P0C090 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm12419-201ENSMUST00000116649 636 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm14942-201ENSMUST00000119642 336 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Mir8093-201ENSMUST00000185043 137 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm37458-201ENSMUST00000194055 410 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm8574-201ENSMUST00000203207 924 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm7600-201ENSMUST00000209657 785 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Olfr584-201ENSMUST00000098210 964 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.93□□□□□ -0.5
Rc3h2P0C090 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rc3h2P0C090 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm25076-201ENSMUST00000104098 132 ntBASIC11.92□□□□□ -0.5
Rc3h2P0C090 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm34023-201ENSMUST00000195539 217 ntBASIC11.92□□□□□ -0.5
Rc3h2P0C090 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.92□□□□□ -0.5
Rc3h2P0C090 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.92□□□□□ -0.5
Rc3h2P0C090 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.92□□□□□ -0.5
Rc3h2P0C090 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.92□□□□□ -0.5
Rc3h2P0C090 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms