Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NclP09405 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NclP09405 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Gm25076-201ENSMUST00000104098 132 ntBASIC17.32■□□□□ 0.36
NclP09405 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Gm12419-201ENSMUST00000116649 636 ntBASIC17.32■□□□□ 0.36
NclP09405 Gm16166-201ENSMUST00000118291 787 ntBASIC17.32■□□□□ 0.36
NclP09405 Gm14942-201ENSMUST00000119642 336 ntBASIC17.32■□□□□ 0.36
NclP09405 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC17.32■□□□□ 0.36
NclP09405 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC17.32■□□□□ 0.36
NclP09405 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC17.32■□□□□ 0.36
NclP09405 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.32■□□□□ 0.36
NclP09405 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NclP09405 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC17.32■□□□□ 0.36
NclP09405 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NclP09405 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NclP09405 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Pck2-205ENSMUST00000226352 2784 ntBASIC17.32■□□□□ 0.36
NclP09405 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.32■□□□□ 0.36
NclP09405 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NclP09405 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 AC108858.2-201ENSMUST00000228186 1425 ntBASIC17.31■□□□□ 0.36
NclP09405 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NclP09405 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Gm9089-201ENSMUST00000122027 526 ntBASIC17.31■□□□□ 0.36
NclP09405 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NclP09405 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.31■□□□□ 0.36
NclP09405 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.31■□□□□ 0.36
NclP09405 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NclP09405 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Gm19692-201ENSMUST00000203856 2084 ntBASIC17.31■□□□□ 0.36
NclP09405 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC17.31■□□□□ 0.36
NclP09405 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NclP09405 AC138329.2-201ENSMUST00000225579 1842 ntBASIC17.31■□□□□ 0.36
NclP09405 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
NclP09405 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Gm45428-201ENSMUST00000209619 1789 ntBASIC17.3■□□□□ 0.36
NclP09405 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC17.3■□□□□ 0.36
NclP09405 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.3■□□□□ 0.36
NclP09405 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC17.3■□□□□ 0.36
NclP09405 Gm37458-201ENSMUST00000194055 410 ntBASIC17.3■□□□□ 0.36
NclP09405 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Gm7600-201ENSMUST00000209657 785 ntBASIC17.3■□□□□ 0.36
NclP09405 Gm8342-201ENSMUST00000209839 757 ntBASIC17.3■□□□□ 0.36
NclP09405 Gm2875-201ENSMUST00000211333 360 ntBASIC17.3■□□□□ 0.36
NclP09405 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NclP09405 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.3■□□□□ 0.36
NclP09405 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms