Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 AC157950.1-201ENSMUST00000217561 2168 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm13182-201ENSMUST00000122241 312 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm38314-201ENSMUST00000195709 625 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm44329-201ENSMUST00000197469 112 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm7600-201ENSMUST00000209657 785 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.87□□□□□ -0.83
Cxcl13O55038 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.87□□□□□ -0.83
Cxcl13O55038 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cxcl13O55038 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cxcl13O55038 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.86□□□□□ -0.83
Cxcl13O55038 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
Cxcl13O55038 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm18065-201ENSMUST00000221395 526 ntBASIC9.86□□□□□ -0.83
Cxcl13O55038 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm23105-201ENSMUST00000083719 134 ntBASIC9.86□□□□□ -0.83
Cxcl13O55038 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.86□□□□□ -0.83
Cxcl13O55038 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.86□□□□□ -0.83
Cxcl13O55038 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cxcl13O55038 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cxcl13O55038 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms