Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.42□□□□□ -0.74
Alx4O35137 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.42□□□□□ -0.74
Alx4O35137 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Alx4O35137 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Alx4O35137 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Alx4O35137 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.42□□□□□ -0.74
Alx4O35137 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.42□□□□□ -0.74
Alx4O35137 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.41□□□□□ -0.74
Alx4O35137 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Alx4O35137 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Gm13226-201ENSMUST00000117838 404 ntBASIC10.41□□□□□ -0.74
Alx4O35137 Gm11500-201ENSMUST00000118237 601 ntBASIC10.41□□□□□ -0.74
Alx4O35137 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.41□□□□□ -0.74
Alx4O35137 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.41□□□□□ -0.74
Alx4O35137 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.41□□□□□ -0.74
Alx4O35137 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Alx4O35137 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.41□□□□□ -0.74
Alx4O35137 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Alx4O35137 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Alx4O35137 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Alx4O35137 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Alx4O35137 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Alx4O35137 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.4□□□□□ -0.74
Alx4O35137 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Alx4O35137 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Alx4O35137 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.4□□□□□ -0.74
Alx4O35137 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.4□□□□□ -0.74
Alx4O35137 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Gm3329-201ENSMUST00000159873 556 ntBASIC10.4□□□□□ -0.74
Alx4O35137 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Alx4O35137 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms