Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ebf3O08791 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Cog3-203ENSMUST00000227473 4197 ntBASIC12.17□□□□□ -0.46
Ebf3O08791 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Ebf3O08791 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ebf3O08791 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ebf3O08791 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.16□□□□□ -0.46
Ebf3O08791 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ebf3O08791 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm14193-201ENSMUST00000105067 153 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm8737-201ENSMUST00000122208 642 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm22138-201ENSMUST00000158748 128 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm23045-201ENSMUST00000175041 96 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm25072-201ENSMUST00000175233 235 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm28324-201ENSMUST00000187913 264 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm5714-201ENSMUST00000197343 566 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm44980-201ENSMUST00000205826 314 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ebf3O08791 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ebf3O08791 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.16□□□□□ -0.46
Ebf3O08791 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Ebf3O08791 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ebf3O08791 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Gm22920-201ENSMUST00000102175 109 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.15□□□□□ -0.46
Ebf3O08791 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Gm11451-201ENSMUST00000118946 630 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Gm1848-201ENSMUST00000120711 789 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.15□□□□□ -0.46
Ebf3O08791 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.15□□□□□ -0.46
Ebf3O08791 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.15□□□□□ -0.46
Ebf3O08791 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Gm4654-201ENSMUST00000183305 982 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.15□□□□□ -0.46
Ebf3O08791 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ebf3O08791 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ebf3O08791 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ebf3O08791 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ebf3O08791 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Ebf3O08791 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ebf3O08791 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.15□□□□□ -0.47
Ebf3O08791 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms