Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Gm22594-201ENSMUST00000104251 130 ntBASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Gm14993-201ENSMUST00000121180 164 ntBASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Gm16165-201ENSMUST00000160140 795 ntBASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc180J3QNE4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Gm25569-201ENSMUST00000157175 131 ntBASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 AC158388.3-202ENSMUST00000225517 775 ntBASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc180J3QNE4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm12129-201ENSMUST00000120104 1147 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Mir6941-201ENSMUST00000184711 59 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm42867-201ENSMUST00000202995 469 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 n-R5s71-201ENSMUST00000093668 119 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm19927-201ENSMUST00000185792 781 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gm43966-201ENSMUST00000203301 612 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc180J3QNE4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc180J3QNE4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms